A few references/facts seems to suggest this:
- Lingerings of Light in a Dark Land by Whitehouse (1873) (available online via Google books). Refers to a community in Kayamkulam that existed alongside the more orthodox Christians of the area. The author doesn't call them Manichaeans, but from his description it is clear they are not "orthodox" Christians.
- an 1911 Encyclopaedia Britannica article (available online) which references W. Germann report of a community of Manichaeans living alongside the orthodox Christians as of the 15th century.
- Burnell (one of the archeologists translating the Persian Cross inscriptions; generally regarded as one of the better ones). Burnell seemed convinced there were Manichaean artifacts waiting to be found in Kerala (he admits the Persian Cross inscriptions were not Manichaean, though).
- The fact that Syrian Christianity (especially the East Syriac kind that was the main form of Christianity in the Zoroastrian Persian Empire) and Buddhism both seemed to have had a foothold in Kerala from ancient times (Manichaeanism being a Gnostic blend of Syriac Christianity, Zoroastrianism, Buddhism, etc.).
Some miscellaneous facts that might be explained by a Manichaean connection to the Nasranis:
- The Nasrani's heavy interest in astrology in ancient times.
- The stories surrounding Mar Abo and Kadamattom Kathanar.
- Astrological signs (moon signs) and peacocks decorating some old Churches.
- Outlier Churches such as the one in Thiruvithamcode.